Based on the answer provided here by user user1830391: Some characters in CSV file are not read during PHP fgetcsv()
I updated my following code to use fgets() instead of fgetcsv(). It fixed my first character issue. thats no longer a prob... but...
what if the .csv file is seprated using ; instead of , Some fields will be wrapped using double quotes "", for example one of my rows is split onto 2 lines. quote opened in the last element of one line and closed at the end of the first element of the next line. There is an "enter"(/n) in that cell. how should i treat this using this code. fgetcsv catches elements within double quotes but i dont think fgets() does.
function runCSVtoArray() {
    // --> FOR IMPORT
    //Function that converts a CSV file to a PHP array.
    //echo '<span class="success">Chargement du fichier CSV pour importation MYSQL....</span><br />';
    $readCharsPerLine = (JRequest::getVar('charsPerLine') > 0) ? JRequest::getVar('charsPerLine') : 1500; /* Import as of 2012-04-16 seem to have max 800chars per line. 1500 is alot of extra. */
    ini_set("auto_detect_line_endings", true);
    iconv_set_encoding("internal_encoding", "UTF-8");
    $openfile = $this->imp['importPath'].$this->imp['csvFileName'];
    if ( file_exists($openfile) ) {
        //echo '<span class="success">Fichier CSV trouvé....</span><br />';
        //echo '<span class="success">Ouverture du fichier : '.$openfile.'</span><br />';
        if (($handle = fopen($openfile, "r")) !== FALSE) {
            //echo '<span class="success">Fichier CSV ouvert... Chargement en cours....</span><br />';
            $row_i=0;
            $this->_importData = array();
            /*while (($data = fgetcsv($handle, $readCharsPerLine, ";")) !== FALSE) {*/
            while (($the_line = fgets($handle)) !== FALSE) {
                $data = explode(';', $the_line);
                $debugoutput = implode('; ', $data).'<br />'; echo ( (JRequest::getVar('encodeutf8')) && ( mb_detect_encoding($debugoutput, "UTF-8") == "UTF-8") ) ? utf8_encode($debugoutput) : $debugoutput.'<br />'; //Debug2
                /*
                $num        = count($data);
                if ($row_i==0) {
                    // TITLE ROW
                    $keyRow = array();
                    for ($c=0; $c < $num; $c++) {
                        //Making title array with CSV first line
                        //Key for colum
                        if ( (JRequest::getVar('encodeutf8')) && ( mb_detect_encoding($data[$c], "UTF-8") == "UTF-8") ) { $data[$c] = utf8_encode($data[$c]); }
                        if ($data[$c]!="") {
                            $keyRow[$c]=trim($data[$c]);
                            $keyRow[$c]=str_replace('GDWACCENT', '', $keyRow[$c]);  //STRIP GDWACCENT, GDW uTF8 fgetcsv fix
                        }
                        else { $keyRow[$c]=''; }
                    }
                } else {
                    //VALUE ROW...
                    for ($c=0; $c < $num; $c++) {
                        $key = $keyRow[$c];
                        if ( (JRequest::getVar('encodeutf8')) && ( mb_detect_encoding($data[$c], "UTF-8") == "UTF-8") ) {
                            $data[$c] = utf8_encode($data[$c]);
                            $data[$c]=str_replace('GDWACCENT', '', $data[$c]);  //STRIP GDWACCENT, GDW uTF8 fgetcsv fix
                        }
                        if ($data[$c]!="") {
                            $this->_importData[$row_i][$key]=trim($data[$c]);
                            $this->_importData[$row_i][$key]=str_replace('GDWACCENT', '', $this->_importData[$row_i][$key]);    //STRIP GDWACCENT, GDW uTF8 fgetcsv fix
                        }
                    }
                }
                */
                $row_i++;
            } //End while()
            //echo '<span class="success">Chargement terminer.... Sauvegarde en cours...</span><br />';
            return true;
        } else {
            //Incapable d'ouvrir le fichier d'importation.
            return false;
        }
    } else {
        //FILE NOT FOUND...
        return false;
    }
} // runCSVtoArray()