So this stems from a problem yesterday that quickly spiraled out of control as the errors were unusual. This problem still exists but the question was put on hold, here, and I was asked to reform a new question that now relates to the current problem. Then I asked a question here and again things quickly moved off topic. I decided to accept the answer that solved the original problem and move on. I now believe we have narrowed the problem down to a very specific question.
This problem now makes 0 sense to me. I have the following code
jQuery
$('#projects').click(function (e) {
$.trim(aid);
alert(aid); 
$.ajax({    
    url:'core/functions/projects.php',
    type: 'post',
    data: {'aid' : aid},
    done: function(data) {
    // this is for testing
    }
    }).fail (function() {
        alert('error');
    }).always(function(data) {
        alert(data);                                        
        $('#home_div').hide();          
        $('#pcd').fadeIn(1000);
        $('#project_table').html(data); 
    });         
});
PHP
<?php
include "$_SERVER[DOCUMENT_ROOT]/core/init.php";
if(isset($_POST['aid'])) {  
    $aid = $_POST['aid'];               
    try {
        $query_projectInfo = $db->prepare("
            SELECT  projects.account_id,
                    projects.project_name,                  
                    projects.pm,    
                    //..irrelevant code      
            FROM projects
            WHERE account_id = ?                        
        "); 
        $query_projectInfo->bindValue(1, $aid, PDO::PARAM_STR);
        $query_projectInfo->execute();
        $count = $query_projectInfo->rowCount();
        if ($count > 0) {
            echo "<table class='contentTable'>";
            echo "<th class='content_th'>" . "Job #" . "</th>";
            echo "<th class='content_th'>" . "Project Name" . "</th>";
            //..irrelevant code          
            while ($row = $query_projectInfo->fetch(PDO::FETCH_ASSOC)) {                
                echo "<tr>";
                echo "<td class='content_td'>" . "<a href='#'>" . $row['account_id'] . "</a>" . "</td>";
                echo "<td class='content_td'>" . $row['project_name'] . "</td>"; 
                //..irrelevant code
                echo "</tr>";
            }
            echo "</table>";            
        }       
    } catch(PDOException $e) {
        die($e->getMessage());
    }   
} else {
    echo 'could not load projects table';
}
?>   
When I run this code by pressing '#projects' I get 2 alerts. This first alert says '6', which is the value of the variable 'aid' and is expected. The second alert is blank.
Now here is where I get extremely confused. If I simplify things and get to the root of the problem by changing my PHP file to look like this
<?php
if(isset($_POST['aid'])) {  
    $aid = $_POST['aid'];
    echo $aid;
} else {
    echo 'fail';    
}
The response is now '6'! Which means the file is receiving my $_POST['aid'] variable and correctly setting it inside PHP. Now if I change the code back, again I receive nothing.
However if I change the original PHP file to this
<?php
include "$_SERVER[DOCUMENT_ROOT]/core/init.php";
    $aid = '6';             
    try {
        $query_projectInfo = $db->prepare("
            SELECT  projects.account_id,
                    projects.project_name,                  
                    projects.pm,    
                    //..irrelevant code      
            FROM projects
            WHERE account_id = ?                        
        "); 
        $query_projectInfo->bindValue(1, $aid, PDO::PARAM_STR);
        $query_projectInfo->execute();
        $count = $query_projectInfo->rowCount();
        if ($count > 0) {
            echo "<table class='contentTable'>";
            echo "<th class='content_th'>" . "Job #" . "</th>";
            echo "<th class='content_th'>" . "Project Name" . "</th>";
            //..irrelevant code          
            while ($row = $query_projectInfo->fetch(PDO::FETCH_ASSOC)) {                
                echo "<tr>";
                echo "<td class='content_td'>" . "<a href='#'>" . $row['account_id'] . "</a>" . "</td>";
                echo "<td class='content_td'>" . $row['project_name'] . "</td>"; 
                //..irrelevant code
                echo "</tr>";
            }
            echo "</table>";            
        }       
    } catch(PDOException $e) {
        die($e->getMessage());
    }    
?> 
Then run the PHP file directly the query is successful and the page loads the table its dynamically creating. Which makes my head spin so much I want to puke.
So in review. The aid variable is set to 6, there is no question. If I simplify my PHP file it receives the $_POST['aid'] variable, takes the data, sets the PHP $aid variable and echo's it back. However if I try and insert it into my query to inflate my table I get nothing. Now if I change the PHP file to not rely on the $_POST['aid'] variable it works. So what the heck is going on here? The PHP file works without the post and the post works without the table inflation query.
I really hope someone can help me figure this out because I am just totally lost
EDIT
I changed my php file around for testing. It now looks EXACTLY like this. Sorry for the wall
<?php
include "{$_SERVER['DOCUMENT_ROOT']}/TrakFlex/core/init.php";
    if(isset($_POST['aid'])) {  
        $aid = $_POST['aid'];
            echo $aid;      
        try {
            $query_projectInfo = $db->prepare("
                SELECT  projects.account_id,
                        projects.project_name,                  
                        projects.pm,    
                        projects.apm,
                        projects.est_start,
                        projects.est_end,
                        projects.contact,                   
                        projects.trips,
                        projects.tasks,
                        projects.perc_complete,
                        projects.bcwp,
                        projects.actuals,
                        projects.cpi,
                        projects.bcws,
                        projects.bac,
                        projects.comments,
                        projects.status,
                        projects.project_revenue,
                        projects.profit_margin,
                        projects.pm_perc,
                        projects.audited         
                FROM projects
                WHERE account_id = ?                        
            "); 
            $query_projectInfo->bindValue(1, $aid, PDO::PARAM_STR);
            $query_projectInfo->execute();      
                echo "<table class='contentTable'>";
                echo "<th class='content_th'>" . "Job #" . "</th>";
                echo "<th class='content_th'>" . "Project Name" . "</th>";
                echo "<th class='content_th'>" . "PM" . "</th>";
                echo "<th class='content_th'>" . "APM" . "</th>"; 
                echo "<th class='content_th'>" . "Est. Start" . "</th>";
                echo "<th class='content_th'>" . "Est. End" . "</th>";
                echo "<th class='content_th'>" . "Contact" . "</th>";
                echo "<th class='content_th'>" . "Trips" . "</th>";
                echo "<th class='content_th'>" . "Tasks" . "</th>";
                echo "<th class='content_th'>" . "% Complete" . "</th>";
                echo "<th class='content_th'>" . "BCWP" . "</th>";
                echo "<th class='content_th'>" . "Actuals" . "</th>";
                echo "<th class='content_th'>" . "CPI" . "</th>";
                echo "<th class='content_th'>" . "BCWS" . "</th>";
                echo "<th class='content_th'>" . "BAC" . "</th>";
                echo "<th class='content_th'>" . "Comments" . "</th>";
                echo "<th class='content_th'>" . "Status" . "</th>";
                echo "<th class='content_th'>" . "Project Revenue" . "</th>";
                echo "<th class='content_th'>" . "Profit Margin" . "</th>";
                echo "<th class='content_th'>" . "PM%" . "</th>";
                echo "<th class='content_th'>" . "Audited" . "</th>";
                while ($row = $query_projectInfo->fetch(PDO::FETCH_ASSOC)) {                
                    echo "<tr>";
                    echo "<td class='content_td'>" . "<a href='#'>" . $row['account_id'] . "</a>" . "</td>";
                    echo "<td class='content_td'>" . $row['project_name'] . "</td>";
                    echo "<td class='content_td'>" . $row['pm'] . "</td>";
                    echo "<td class='content_td'>" . $row['apm'] . "</td>";
                    echo "<td class='content_td'>" . $row['est_start'] . "</td>";
                    echo "<td class='content_td'>" . $row['est_end'] . "</td>";
                    echo "<td class='content_td'>" . $row['contact'] . "</td>";
                    echo "<td class='content_td'>" . $row['trips'] . "</td>";
                    echo "<td class='content_td'>" . $row['tasks'] . "</td>";
                    echo "<td class='content_td'>" . $row['perc_complete'] . "</td>";
                    echo "<td class='content_td'>" . $row['bcwp'] . "</td>";
                    echo "<td class='content_td'>" . $row['actuals'] . "</td>";
                    echo "<td class='content_td'>" . $row['cpi'] . "</td>";
                    echo "<td class='content_td'>" . $row['bcws'] . "</td>";
                    echo "<td class='content_td'>" . $row['bac'] . "</td>";
                    echo "<td class='content_td'>" . $row['comments'] . "</td>";
                    echo "<td class='content_td'>" . $row['status'] . "</td>";
                    echo "<td class='content_td'>" . $row['project_revenue'] . "</td>";
                    echo "<td class='content_td'>" . $row['profit_margin'] . "</td>";
                    echo "<td class='content_td'>" . $row['pm_perc'] . "</td>";
                    echo "<td class='content_td'>" . $row['audited'] . "</td>";
                    echo "</tr>";
                }
                echo "</table>";                
        } catch(PDOException $e) {
            die($e->getMessage());
        }   
    } else {    
        echo 'could not load projects table';
    }
    ?>
The response I get in my browser is now this
6<table class='contentTable'><th class='content_th'>Job #</th><th class='content_th'>Project Name</th><th class='content_th'>PM</th><th class='content_th'>APM</th><th class='content_th'>Est. Start</th><th class='content_th'>Est. End</th><th class='content_th'>Contact</th><th class='content_th'>Trips</th><th class='content_th'>Tasks</th><th class='content_th'>% Complete</th><th class='content_th'>BCWP</th><th class='content_th'>Actuals</th><th class='content_th'>CPI</th><th class='content_th'>BCWS</th><th class='content_th'>BAC</th><th class='content_th'>Comments</th><th class='content_th'>Status</th><th class='content_th'>Project Revenue</th><th class='content_th'>Profit Margin</th><th class='content_th'>PM%</th><th class='content_th'>Audited</th></table>
Which means two things. The aid variable is being passed and set. However when I run it in my query it fails. But if I put $aid = '6'; then bind aid as a value it works.
WHY?
2nd EDIT
So through the help of others we found out this was a js error not a php one. The variable is being set to 6 in the js but it has some hidden characters and I think I found them. When I look in firebug I see this as the source
aid=%0D%0A6
which is supposed to be a line break right? I think that's what's causing the errors.
This is how I'm getting aid
var title;
var aid;
$(".sa").click(function (e) {
    title = $(this).text();
    $.post('core/functions/getAccountId.php', { 
        title: title              
    })
    .done(function(data) {
        aid = data;     
        $("#acc_title").html(title);    
        $('#accountsSelectDiv').hide();
        $('#acc_home').fadeIn(1000);
        $('#home_div').show();      
    })
    .fail(function(jqXHR, status, error) {
        alert(error);
    });     
});
This might be because of how I'm getting it, I have no idea. How do I remove the extra characters in the source though? That is what I think the problem is
 
     
     
    