When you try and access a variable, JavaScript, first look for that variable in the current function scope, next, in the enclosed functions scope and then finally in the global scope. In your case, self is a member of this, global object. When you say this.self, and if this refers to the global scope, this.self is same as the self. Unless you change the current context, this will refer to the global object and it should work. Check the following example to understand better.
myGlobalVar = function() {
    this.self = "thefourtheye";
    this.Whatever = function() {
        console.log(self);
        console.log(this.self);
        console.log(this.self === self);
    }
}
var b = {
    self: "thethirdeye"
}
myGlobalVar();
Whatever();
console.log("-------------------");
Whatever.apply(b);
Output
thefourtheye
thefourtheye
true
-------------------
thefourtheye
thethirdeye
false
When I am calling Whatever, the second time, I am setting the current context to object b, with apply. So, now this points to b. Now, self is different from this.self. When I refer self, it looks up the hierarchy and finds self in the global scope, it prints thefourtheye, when I say this.self, it looks up self in b and it prints thethirdeye. Hope its clear now.