onBindHolder called several times as Recycler View needs a view unless new one. So each time you set visilibity in child views, other views states are also changes.
Whenever you scroll up and down, these views are getting re-drawed with wrong visibility options so always specify both the conditions cause recycler view doesn't know the previous state/conditions/values of our widgets.
Solution :
If in If block you set visibility of any android widget.setVisibility(View.Gone) then in else block you have to set it's visibility opposite vwith widget.setVisibility(View.Visible) to overcome the above problem.
 @Override
public void onBindViewHolder(ViewHolder viewHolder, int i) {
    viewHolder.tvName.setText(ModelCategoryProducts.name.get(i));
    viewHolder.tvPrice.setText("Rs."+String.format("%.2f", Float.parseFloat(ModelCategoryProducts.price.get(i))));
    if(ModelCategoryProducts.special_price.get(i).equals("null")) {
        viewHolder.tvSpecialPrice.setVisibility(View.GONE); // here visibility is gone and in else it's opposite visibility i set.
        viewHolder.tvPrice.setTextColor(Color.parseColor("#ff0000"));
        viewHolder.tvPrice.setPaintFlags(0);// here paint flag is 0 and in else it's opposite flag that i want is set.
    }else if(!ModelCategoryProducts.special_price.get(i).equals("null")){
        viewHolder.tvPrice.setTextColor(Color.parseColor("#E0E0E0"));
        viewHolder.tvSpecialPrice.setVisibility(View.VISIBLE);
        viewHolder.tvSpecialPrice.setText("Rs." + String.format("%.2f", Float.parseFloat(ModelCategoryProducts.special_price.get(i))));
        viewHolder.tvPrice.setPaintFlags(viewHolder.tvPrice.getPaintFlags() | Paint.STRIKE_THRU_TEXT_FLAG);
    }
    if (!ModelCategoryProducts.image_url.get(i).isEmpty()) {
        Picasso.with(context)
                .load(ModelCategoryProducts.image_url.get(i))
                .into(viewHolder.ivProduct);
    }
    viewHolder.setClickListener(new ItemClickListener() {
        @Override
        public void onClick(View view, int position, boolean isLongClick) {
            if (isLongClick) {
//                    Toast.makeText(context, "#" + position + " - " + ModelCategoryProducts.name.get(position) + " (Long click)", Toast.LENGTH_SHORT).show();
            } else {
                Toast.makeText(context, "#" + position + " - " + ModelCategoryProducts.name.get(position), Toast.LENGTH_SHORT).show();
                Intent i = new Intent(context, ProductDetail.class);
                i.putExtra("position",position);
                i.putExtra("flagHlvCheck", 5);
                context.startActivity(i);
            }
        }
    });
}