I am very new in gtk3, and possibly messed up my python as well.
In my menu.py, I have defined my menubar in xml:
import gi
gi.require_version("Gtk", "3.0")
from gi.repository import Gtk, Gdk, Pango
UI_INFO = """
<ui>
  <menubar name='MenuBar'>
      <menu action='FileNew'>
        <menuitem action='FileNewStandard' />
      <menuitem action='FileOpenStandard' />
      <menuitem action='FileQuit' />
    </menu>
    <menu action='EditMenu'>
      <menuitem action='EditCopy' />
      <menuitem action='EditPaste' />
    </menu>
    <menu action='ChoicesMenu'>
      <menuitem action='Book'/>
      <menuitem action='Wine'/>
    </menu>
  </menubar>
  <popup name='PopupMenu'>
    <menuitem action='EditCopy' />
    <menuitem action='EditPaste' />
  </popup>
</ui>
"""
class MenuWindow(Gtk.Window):
    def __init__(self):
        Gtk.Window.__init__(self, title="Menu Example")
        action_group = Gtk.ActionGroup("my_actions")
        self.add_file_menu_actions(action_group)
        self.add_edit_menu_actions(action_group)
        self.add_choices_menu_actions(action_group)
        uimanager = self.create_ui_manager()
        uimanager.insert_action_group(action_group)
        menubar = uimanager.get_widget("/MenuBar")
        # button = Gtk.Button("Open")    # Submit button to write to
        # button.connect("clicked", self.on_button_clicked)
    def add_file_menu_actions(self, action_group):
        action_filenewmenu = Gtk.Action("FileNew", None, None, Gtk.STOCK_NEW)
        action_group.add_action(action_filenewmenu)
        action_new = Gtk.Action("FileNewStandard", "_New",
                                "Create a new file", Gtk.STOCK_NEW)
        # action_new.connect("activate", self.on_menu_file_new_generic)
        action_group.add_action_with_accel(action_new, None)
        action_fileopen = Gtk.Action("FileOpen", None, None, Gtk.STOCK_OPEN)
        action_group.add_action(action_fileopen)
        action_open = Gtk.Action("FileOpenStandard", "_Open",
                                 "Open an existing file", Gtk.STOCK_OPEN)
        # action_open.connect("activate", self.file_open_clicked)
        action_group.add_action_with_accel(action_open, None)
        action_filequit = Gtk.Action("FileQuit", None, None, Gtk.STOCK_QUIT)
        # action_filequit.connect("activate", self.on_menu_file_quit)
        action_group.add_action(action_filequit)
    def add_edit_menu_actions(self, action_group):
        action_group.add_actions([
            ("EditMenu", None, "Edit"),
            ("EditCopy", Gtk.STOCK_COPY, None, None, None,
             self.on_menu_others),
            ("EditPaste", Gtk.STOCK_PASTE, None, None, None,
             self.on_menu_others),
        ])
    def add_choices_menu_actions(self, action_group):
        action_group.add_action(Gtk.Action("ChoicesMenu", "Choices", None,
                                           None))
        action_group.add_radio_actions([
            ("Book", None, "Book", None, None, 1),
            ("Wine", None, "Wine", None, None, 2)
        ], 1, self.on_menu_choices_changed)
    def create_ui_manager(self):
        uimanager = Gtk.UIManager()
        # Throws exception if something went wrong
        uimanager.add_ui_from_string(UI_INFO)
        # Add the accelerator group to the toplevel window
        accelgroup = uimanager.get_accel_group()
        self.add_accel_group(accelgroup)
        return uimanager
And I have called this in my main function as:
#!/usr/bin/python3
import gi
gi.require_version("Gtk", "3.0")
from gi.repository import Gtk, Gdk
import menu
class MainWindow(Gtk.Window):
    def __init__(self):
        Gtk.Window.__init__(self, title="Collection Manager")
        self.set_default_size(1000, 20)
        self.set_border_width(10)
        box = Gtk.Box(orientation=Gtk.Orientation.VERTICAL)
        MenuElem = menu.MenuWindow()
        box.pack_start(MenuElem, False, False, 0)
        self.add(box)
window = MainWindow()
window.connect("delete-event", Gtk.main_quit)
window.show_all()
Gtk.main()
I must be dowing something very wrong, as I am getting error:
python3 main2.py 
(main2.py:15800): Gtk-WARNING **: Can't set a parent on a toplevel widget
(main2.py:15800): Gtk-CRITICAL **: gtk_widget_destroy: assertion 'GTK_IS_WIDGET (widget)' failed
And instead of menubar, I am getting two window as:
Kindly help
EDIT: From Cilyan's reply I am getting error:
 python3 main_mini.py 
Traceback (most recent call last):
  File "main_mini.py", line 24, in <module>
    window = MainWindow()
  File "main_mini.py", line 15, in __init__
    MenuElem = menu.MenuManager()
  File "/home/rudra/Devel/Cmanage/menu.py", line 32, in __init__
    super.__init__()
TypeError: descriptor '__init__' of 'super' object needs an argument
 
    