When running test-app in grails 3.0, or run-app, grails runs its own version of the embedded Tomcat server. I was able to conclude this from the following link: https://roshandawrani.wordpress.com/2011/03/13/grails-tip-configuring-embedded-tomcat-instance-used-in-developmenttest-env/
However, the context.xml and server.xml files are precompiled with the pulled down libraries. When creating a grails app from scratch, I cannot find either of there two files. Same is true for config.groovy, as it is located within an external library.
I am trying to inject JNDI resources, into the container, so that I can invoke them. Something like this:
<Resource name="myDatasourceName" auth="Container" type="javax.sql.DataSource"
    maxActive="100" maxIdle="30" maxWait="10000"
    username="root" password="password" driverClassName="com.mysql.jdbc.Driver"
    url="jdbc:mysql://localhost:3306/my_db_name"/>
In the first link, the authors provide a way to do it in a scripts/_Events.groovy directory, but I do not have this either.
UPDATE 1: Non-working code
import grails.boot.GrailsApp
import grails.boot.config.GrailsAutoConfiguration
import org.apache.catalina.Context
import org.apache.catalina.startup.Tomcat
import org.apache.tomcat.util.descriptor.web.ContextResource
import org.springframework.boot.autoconfigure.SpringBootApplication
import org.springframework.boot.context.embedded.tomcat.TomcatEmbeddedServletContainer
import org.springframework.boot.context.embedded.tomcat.TomcatEmbeddedServletContainerFactory
import org.springframework.context.annotation.Bean
@SpringBootApplication
class Application extends GrailsAutoConfiguration {
    static void main(String[] args) {
        GrailsApp.run(Application, args)
    }
    @Bean
    public TomcatEmbeddedServletContainerFactory tomcatFactory() {
        return new TomcatEmbeddedServletContainerFactory() {
            @Override
            protected TomcatEmbeddedServletContainer getTomcatEmbeddedServletContainer(
                    Tomcat tomcat) {
                tomcat.enableNaming();
                return super.getTomcatEmbeddedServletContainer(tomcat);
            }
            @Override
            protected void postProcessContext(Context context) {
                context.getNamingResources().addResource(preconfigureDbResource("oneSource", "127.0.0.1"))
                context.getNamingResources().addResource(preconfigureDbResource("nextSource", "127.0.0.1"))
            }
        }
    }
    private ContextResource preconfigureDbResource(String name, String ip) {
        ContextResource resource = new ContextResource()
        resource.setType("javax.sql.DataSource")
        resource.setName("jdbc/" + name)
        resource.setProperty("url", "jdbc:oracle:thin:@" + ip + ":1521:ucop")
        resource.setProperty("driverClassName", "oracle.jdbc.driver.OracleDriver")
        resource.setProperty("username", "coolio")
        resource.setProperty("password", "password")
        resource.setProperty("auth", "Container")
        resource.setProperty("maxTotal", "100")
        resource.setProperty("maxIdle", "30")
        resource.setProperty("maxWaitMillis", "10000")
        return resource;
    }
}
I am calling this source like this in my service file:
public DataSource getOneSource() {
    Context context = (Context) new InitialContext().lookup("java:/comp/env")
        oneSource= (DataSource) context.lookup("jdbc/oneSource")
    return oneSource
}    
But I am getting an error stating:
javax.naming.NameNotFoundException: Name [comp/env] is not bound in this Context. Unable to find [comp].
Has anyone done this before? I would not be surprised if there is an extra thread that is overwriting the context.