The issue here lies with your .content-container wrapper class, which has a CSS declaration of webkit-transform: translate3d(0,0,0). The transform declaration, as this answer illustrates, changes the positioning context from the viewport to the rotated element, which essentially means that your fixed element behaves as if it were absolutely positioned. Here's an example showing the difference between a fixed element inside a transformed div and a fixed element outside of that div.
.rotate {
  transform: rotate(30deg);
  background: blue;
  width: 300px;
  height: 300px;
  margin: 0 auto;
}
.fixed {
  position: fixed;
  background: red;
  padding: 10px;
  color: white;
  top: 50px;
}
<div class="rotate">
  <div class="fixed"> I am fixed inside a rotated div.</div>
</div>
<div class="fixed"> I am fixed outside a rotated div.</div>
 
 
In order for everything to work, you'll need to remove the transform3d declaration from .content-container.