My embedded tomcat class recognizes the web.xml and ServletContainerInitializers, but it doesn't recognize the web-fragments. Very simple code. What flag/config should be turned on for web-fragments to initialized?
    public static void main( String[] args ){
    Logger root = (Logger) LoggerFactory.getLogger(Logger.ROOT_LOGGER_NAME);
    root.setLevel(Level.INFO);
    String webappDirLocation = "src/main/webapp/";
    Tomcat tomcat = new Tomcat();
    tomcat.getHost().setAutoDeploy(true);
    tomcat.getHost().setDeployOnStartup(true);
    tomcat.setPort(8080);
    StandardContext ctx = null;
    try {
        ctx = (StandardContext) tomcat.addWebapp("/", new File(webappDirLocation).getAbsolutePath());
    } catch (ServletException e) {
        e.printStackTrace();
    }
    System.out.println("configuring app with basedir: " + new File("./" + webappDirLocation).getAbsolutePath());
    File additionWebInfClasses = new File("target/classes");
    WebResourceRoot resources = new StandardRoot(ctx);
    resources.addPreResources(new DirResourceSet(resources,
                                "/WEB-INF/classes",
                                additionWebInfClasses.getAbsolutePath(),
                                "/"));
    ctx.setResources(resources);
    ctx.setAltDDName( webappDirLocation + "WEB-INF/web.xml");
    ServletContextListener scl = new AdminServletContextListener();
    ctx.addApplicationEventListener(scl);
    try {
        tomcat.start();
        tomcat.getServer().start();
    } catch (LifecycleException e) {
        e.printStackTrace();
    }
    tomcat.getServer().await();
}