There are multiple ways to do this:
Try any of these:
1.  .clear() 
2. .destroy() 
myLineChart.destroy();
Then re-initialize the chart:
var ctx = document.getElementById("myChartLine").getContext("2d");
myLineChart = new Chart(ctx).Line(data, options);
- delete the  element and then reappending a new  to the parent container - var resetCanvas = function () {
 -    $('#results-graph').remove(); // this is my <canvas> element
   $('#graph-container').append('<canvas id="results-graph"><canvas>');
  canvas = document.querySelector('#results-graph'); 
  ctx = canvas.getContext('2d');
  ctx.canvas.width = $('#graph').width(); // resize to parent width
  ctx.canvas.height = $('#graph').height(); // resize to parent height
  var x = canvas.width/2;
  var y = canvas.height/2;
  ctx.font = '10pt Verdana';
  ctx.textAlign = 'center';
  ctx.fillText('This text is centered on the canvas', x, y);
};`
 
- .update( ) 
Calling update() on your Chart instance will re-render the chart with any updated values, allowing you to edit the value of multiple existing points, then render those in one animated render loop.
Also refer:
How to clear a chart from a canvas so that hover events cannot be triggered?
chart.js load totally new data