Error: pg_config executable not found when installing psycopg2 on Alpine in Docker

Question

I'm trying to build a Flask app using Postgres with Docker. I'd like to connect to an AWS RDS instance of Postgres, but use Docker for my Flask app. However, when trying to set up psycopg2 it runs into an error because it can't find pg_config. Here's the error:

Building api
Step 1/5 : FROM python:3.6.3-alpine3.6
 ---> 84c98ca3b5c5
Step 2/5 : WORKDIR /usr/src/app
 ---> Using cache
 ---> 407c158f5ee4
Step 3/5 : COPY . .
 ---> 966df18d329e
Step 4/5 : RUN pip install -r requirements.txt
 ---> Running in 284cc97aeb63
Collecting aniso8601==1.3.0 (from -r requirements.txt (line 1))
  Downloading aniso8601-1.3.0.tar.gz (57kB)
Collecting click==6.7 (from -r requirements.txt (line 2))
  Downloading click-6.7-py2.py3-none-any.whl (71kB)
Collecting Flask==0.12.2 (from -r requirements.txt (line 3))
  Downloading Flask-0.12.2-py2.py3-none-any.whl (83kB)
Collecting Flask-RESTful==0.3.6 (from -r requirements.txt (line 4))
  Downloading Flask_RESTful-0.3.6-py2.py3-none-any.whl
Collecting Flask-SQLAlchemy==2.3.2 (from -r requirements.txt (line 5))
  Downloading Flask_SQLAlchemy-2.3.2-py2.py3-none-any.whl
Collecting itsdangerous==0.24 (from -r requirements.txt (line 6))
  Downloading itsdangerous-0.24.tar.gz (46kB)
Collecting Jinja2==2.9.6 (from -r requirements.txt (line 7))
  Downloading Jinja2-2.9.6-py2.py3-none-any.whl (340kB)
Collecting MarkupSafe==1.0 (from -r requirements.txt (line 8))
  Downloading MarkupSafe-1.0.tar.gz
Collecting psycopg2==2.7.3.1 (from -r requirements.txt (line 9))
  Downloading psycopg2-2.7.3.1.tar.gz (425kB)
    Complete output from command python setup.py egg_info:
    running egg_info
    creating pip-egg-info/psycopg2.egg-info
    writing pip-egg-info/psycopg2.egg-info/PKG-INFO
    writing dependency_links to pip-egg-info/psycopg2.egg-info/dependency_links.txt
    writing top-level names to pip-egg-info/psycopg2.egg-info/top_level.txt
    writing manifest file 'pip-egg-info/psycopg2.egg-info/SOURCES.txt'
    Error: pg_config executable not found.

    Please add the directory containing pg_config to the PATH
    or specify the full executable path with the option:

        python setup.py build_ext --pg-config /path/to/pg_config build ...

    or with the pg_config option in 'setup.cfg'.

    ----------------------------------------
Command "python setup.py egg_info" failed with error code 1 in /tmp/pip-build-01lf5grh/psycopg2/
ERROR: Service 'api' failed to build: The command '/bin/sh -c pip install -r requirements.txt' returned a non-zero code: 1

Here's my Dockerfile:

FROM python:3.6.3-alpine3.6

WORKDIR /usr/src/app

COPY . .

RUN pip install -r requirements.txt

CMD ["python", "app.py"]

Many others seem to have a similar issue locally, but none of them involve using Docker. This seems like a Docker issue because I can set up a local virtual environment and the setup works just fine since I have Postgres installed locally and it's able to find my local pg_config.

It appears that during the container build/setup, Docker is trying to find pg_config within the container. Is there a way to install a pg_config in the container, even though I won't be using a containerized instance of Postgres, but rather the instance on RDS?

Any and all suggestions on how to get around this are welcomed.

Answer 1

Tested with Python 3.4.8, 3.5.5, 3.6.5 and 2.7.14 (just replace 3 with 2):

# You can use a specific version too, like python:3.6.5-alpine3.7
FROM python:3-alpine

WORKDIR /usr/src/app

COPY requirements.txt .

RUN \
 apk add --no-cache postgresql-libs && \
 apk add --no-cache --virtual .build-deps gcc musl-dev postgresql-dev && \
 python3 -m pip install -r requirements.txt --no-cache-dir && \
 apk --purge del .build-deps

COPY . .

CMD ["python3", "app.py"]

Explanation: to build Psycopg you need the packages gcc musl-dev postgresql-dev. Then you also need that pg_config executable: while simply installing postgresql-dev will work, postgresql-libs does fine too and takes up some 12 MB less space.

---

Here's the original version of the answer (based on this Dockerfile) where I manually install Python onto a pure Alpine image because at that time Python did not provide the Docker image with Python 3.6 and Alpine 3.7. If you want to install Python 2.7 like that, also do apk add py2-pip (called py-pip in older Alpine repos).

FROM alpine:3.7

WORKDIR /usr/src/app

COPY requirements.txt .

RUN \
 apk add --no-cache python3 postgresql-libs && \
 apk add --no-cache --virtual .build-deps gcc python3-dev musl-dev postgresql-dev && \
 python3 -m pip install -r requirements.txt --no-cache-dir && \
 apk --purge del .build-deps

COPY . .

CMD ["python3", "app.py"]

Answer 2

Simply add these commands (psycopg2 dependencies) before installing dependencies from requirements.txt in Dockerfile

# install psycopg2 dependencies
RUN apk update
RUN apk add postgresql-dev gcc python3-dev musl-dev

Source: https://testdriven.io/blog/dockerizing-django-with-postgres-gunicorn-and-nginx/

Answer 3

I solved this by adding the following to my Dockerfile:

RUN apt-get update \
    && apt-get -y install libpq-dev gcc \
    && pip install psycopg2

this will install psycopg2 dependencies.

Answer 4

You could try:

pip install psycopg2-binary

Answer 5

On Python 3 you just need to do the following:

sudo apt install libpq-dev python3-dev