The following is the yocto patch that adds this diagnostic message
https://patchwork.openembedded.org/patch/133517/
Here is the commit message, explaining its reasons and a possible way to get further details for the problem:
Bitbake can parse metadata in the cooker and in the worker during
  builds. If the metadata isn't deterministic, it can change between
  these two parses and this confuses things a lot. It turns out to be
  hard to debug these issues currently.
This patch ensures the basehashes from the original parsing are passed
  into the workers and that these are checked when reparsing for
  consistency. The user is shown an error message if inconsistencies are
  found.
There is debug code in siggen.py (see the "Slow but can be useful for
  debugging mismatched basehashes" commented code), we don't enable this
  by default due to performance issues. If you run into this message,
  enable this code and you will find "sigbasedata" files in tmp/stamps
  which should correspond to the hashes shown in this error message.
  bitbake-diffsigs on the files should show which variables are
  changing.
Signed-off-by: Richard Purdie