Note: subObj, subObj2, subObj3, subObj4 are all objects {}
Here is the code:
for (var key in subObj) {
  if (subObj.hasOwnProperty(key)) {
    subObj2 = subObj[key];
    subObj3["player"] = subObj2["player"];
    subObj3["bodypart"] = subObj2["bodypart"];
    subObj3["type"] = subObj2["type"];
    subObj3["result"] = subObj2["result"];
    aux = subObj2["zone"];
    //WARNING: here is the problem. All object content (except keys) are being set to subObj3
    console.log(subObj4); 
    //initialize > important! (this creates new properties in object)
    if (!subObj4.hasOwnProperty(aux)) {
      subObj4[aux] = {};
    }
    if (!subObj4[aux].hasOwnProperty(key)) {
      subObj4[aux][key] = {};
    }
    //store
    subObj4[aux][key] = subObj3;
    console.log("aux = ", aux, " key = ", key);
    console.log(subObj3);
    console.log(subObj4);
  } //endif
} //endfor 
Console Logs
current output:
1st loop:
//log of "aux" and "key"
aux = e3c , key = 1
//log of "subObj3"
    {player: "john", bodypart: "h", type: "open_t", result: "correct"}
//log of "subObj4"
    {e3c:{ 
            1:{player: "john", bodypart: "h", type: "open_t", result: "correct"}
        }
    }
2nd loop:
//log of "aux" and "key"
aux = e3c , key = 4
//log of "subObj3"
    {player: "robert", bodypart: "lf", type: "open_t", result: "incorrect"}
//log of "subObj4"
    {e3c:{ 
            1:{player: "robert", bodypart: "lf", type: "open_t", result: "incorrect"}
            4:{player: "robert", bodypart: "lf", type: "open_t", result: "incorrect"}
        }
    }
expected output:
//log of "subObj4"
    {e3c:{ 
            1:{player: "john", bodypart: "h", type: "open_t", result: "correct"}
            4:{player: "robert", bodypart: "lf", type: "open_t", result: "incorrect"}
        }
    }
After more debugging i found were the object is changing its values (its commented in the code with a "Warning"). Is in that line that all the object values change
 
     
    