You can simply validate the choice by testing against the list, then print the topping string itself:
if customerSandwichtoppings in toppings:
    print("Yes sir!\nHalf bread:", customerSandwichtoppings)
else:
    print("Sorry sir, that's not a topping we have")
You can combine this with the bread size; ask for both once, then combine the strings; you can uppercase the first letter of the bread choice with str.title():
while True:
    customerSandwichsize = input("What size do you want: " + str(size) + " ")
    if customerSandwichsize in size:
        break
    print("Sorry sir, that's not a size we have")
print("Okay, a", customerSandwichsize, "bread for you")
while True:
    customerSandwichtoppings = input("What toppings to you want: " + str(toppings) + " ")
    if customerSandwichtoppings in toppings:
        break
    print("Sorry sir, that's not a topping we have")
print("Yes sir!\n" + customerSandwichsize.title() + " bread:", customerSandwichtoppings)
The while True: loops keep asking the user for the right information; if the in test is true a valid choice was made
If the user can pick more toppings, you'll have to keep a list and keep looping:
picked_toppings = []
while True:
    customerSandwichtopping = input("What toppings to you want: " + str(toppings) + " ")
    if customerSandwichtopping == 'done':
        if not picked_toppings:
            print("Sorry sir, you haven't picked any toppings yet")
            continue
        # at least one topic picked, the customer is allowed to be done,
        # break out of the while loop.
        break
    if customerSandwichtopping not in toppings:
        print("Sorry sir, that's not a topping we have")
        continue
    if customerSandwichtopping in picked_toppings:
        print("Sorry sir, you already picked that topping")
        continue
    picked_toppings.append(customerSandwichtopping)
    print("Sure thing sir. You can pick more toppings, or say 'done' when you're done.")
then print the list:
print("Yes sir!\n" + customerSandwichsize.title() + " bread:", picked_toppings)
Put together as a function that'd look like:
def sandwich_maker(size, toppings, sauce):
    while True:
        customerSandwichsize = input("What size do you want: {} ".format(size))
        if customerSandwichsize in size:
            break
        print("Sorry sir, that's not a size we have")
    print("Okay, a", customerSandwichsize, "bread for you")
    picked_toppings = []
    while True:
        customerSandwichtopping = input("What toppings to you want: " + str(toppings) + " ")
        if customerSandwichtopping == 'done':
            if not picked_toppings:
                print("Sorry sir, you haven't picked any toppings yet")
                continue
            # at least one topic picked, the customer is allowed to be done,
            # break out of the while loop.
            break
        if customerSandwichtopping not in toppings:
            print("Sorry sir, that's not a topping we have")
            continue
        if customerSandwichtopping in picked_toppings:
            print("Sorry sir, you already picked that topping")
            continue
        picked_toppings.append(customerSandwichtopping)
        print("Sure thing sir. You can pick more toppings, or say 'done' when you're done.")
    print("Yes sir!\n" + customerSandwichsize.title() + " bread:", picked_toppings)