Servlet.init() for servlet ctakes-rest-service threw exception

Question

I am a beginner to programming. I am trying to run ctakes API in windows version but getting the following errors when I am trying to get response through Postman. Could anyone please guide me towards correct steps? Thanks in advance.

javax.servlet.ServletException: Servlet.init() for servlet ctakes-rest-service threw exception
    org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:444)
    org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:104)
    org.apache.catalina.valves.AccessLogValve.invoke(AccessLogValve.java:1025)
    org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:445)
    org.apache.coyote.http11.AbstractHttp11Processor.process(AbstractHttp11Processor.java:1137)
    org.apache.coyote.AbstractProtocol$AbstractConnectionHandler.process(AbstractProtocol.java:637)
    org.apache.tomcat.util.net.AprEndpoint$SocketProcessor.doRun(AprEndpoint.java:2579)
    org.apache.tomcat.util.net.AprEndpoint$SocketProcessor.run(AprEndpoint.java:2568)
    java.util.concurrent.ThreadPoolExecutor.runWorker(Unknown Source)
    java.util.concurrent.ThreadPoolExecutor$Worker.run(Unknown Source)
    org.apache.tomcat.util.threads.TaskThread$WrappingRunnable.run(TaskThread.java:61)
    java.lang.Thread.run(Unknown Source)

org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'ctakesRestController': Invocation of init method failed; nested exception is javax.servlet.ServletException: org.apache.uima.resource.ResourceInitializationException: Initialization of annotator class "org.apache.ctakes.dictionary.lookup2.concurrent.ThreadSafeFastLookup" failed.  (Descriptor: <unknown>)
    org.springframework.beans.factory.annotation.InitDestroyAnnotationBeanPostProcessor.postProcessBeforeInitialization(InitDestroyAnnotationBeanPostProcessor.java:137)
    org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.applyBeanPostProcessorsBeforeInitialization(AbstractAutowireCapableBeanFactory.java:409)
    org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1620)
    org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:555)
    org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:483)
    org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:306)
    org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:230)
    org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:302)
    org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:197)
    org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:761)
    org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:867)
    org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:543)
    org.springframework.web.servlet.FrameworkServlet.configureAndRefreshWebApplicationContext(FrameworkServlet.java:668)
    org.springframework.web.servlet.FrameworkServlet.createWebApplicationContext(FrameworkServlet.java:634)
    org.springframework.web.servlet.FrameworkServlet.createWebApplicationContext(FrameworkServlet.java:682)
    org.springframework.web.servlet.FrameworkServlet.initWebApplicationContext(FrameworkServlet.java:553)
    org.springframework.web.servlet.FrameworkServlet.initServletBean(FrameworkServlet.java:494)
    org.springframework.web.servlet.HttpServletBean.init(HttpServletBean.java:171)
    javax.servlet.GenericServlet.init(GenericServlet.java:158)
    org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:444)
    org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:104)
    org.apache.catalina.valves.AccessLogValve.invoke(AccessLogValve.java:1025)
    org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:445)
    org.apache.coyote.http11.AbstractHttp11Processor.process(AbstractHttp11Processor.java:1137)
    org.apache.coyote.AbstractProtocol$AbstractConnectionHandler.process(AbstractProtocol.java:637)
    org.apache.tomcat.util.net.AprEndpoint$SocketProcessor.doRun(AprEndpoint.java:2579)
    org.apache.tomcat.util.net.AprEndpoint$SocketProcessor.run(AprEndpoint.java:2568)
    java.util.concurrent.ThreadPoolExecutor.runWorker(Unknown Source)
    java.util.concurrent.ThreadPoolExecutor$Worker.run(Unknown Source)
    org.apache.tomcat.util.threads.TaskThread$WrappingRunnable.run(TaskThread.java:61)
    java.lang.Thread.run(Unknown Source)

Following link may helps you try once.[Link](https://stackoverflow.com/questions/45563076/http-status-500-servlet-init-for-servlet-jersey-servlet-threw-exception-when) — Jagadeeswar, Nov 28 '19 at 06:45

score 1 · Accepted Answer · answered Oct 28 '20 at 12:50

1

It could be a SQL configuration issue some part of the process, especially if the password differs from that is expected on the root account in one of the configuration files.

Please try out https://github.com/GoTeamEpsilon/ctakes-rest-service/issues/43 to see if this very similar if not identical stack trace faced can help you out.

answered Oct 28 '20 at 12:50

demongolem

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It was root access password issue as far I remember! – Al Jawad Nafad Mar 22 '21 at 11:01

Servlet.init() for servlet ctakes-rest-service threw exception

1 Answers1