Here is my table:
+----+---------+------------+----------+
| id | message | projectID  | noteType |
+----+---------+------------+----------+
|  1 |       1 |    125 |   update |
|  2 |       2 |    125 |   update |
|  3 |       3 |    125 |   update |
|  4 |       4 |    125 |   update |
|  5 |       5 |    125 |   update |
|  6 |       6 |    125 |   update |
My query using the suggestion below:
SELECT `p`.`id`, `proName`, `p`.`proType`, `p`.`priority`, 
`p`.`busSegment`, `p`.`portfolio`, `p`.`description`, 
(SELECT group_concat('<li>', `message`, '</li>') AS temp FROM (SELECT 
projectID, message FROM notes where projectID = p.id AND noteType = 
'update' ORDER BY id DESC LIMIT 3) three_messages GROUP BY projectID) as 
updates
FROM `projects` as `p` 
WHERE `p`.`id` = 125
Error:
Error Code: 1054. Unknown column 'p.id' in 'where clause'
All records are returned. For some reason, the LIMIT 3 is not working.
The suggestion query work by it self.
SELECT group_concat('<li>', `message`, '</li>') AS updates
FROM (
    SELECT projectID, message
    FROM notes  where projectID = 125 AND noteType = 'update'
    ORDER BY id DESC
    LIMIT 3
) three_messages
GROUP BY projectID;
+---------------------+
| updates             |
+---------------------+
| 6,5,4               |
+---------------------+
 
     
    