I posed a question to Stackoverflow a few weeks ago about a creating an efficient algorithm to search for a pattern in a large chunk of text. Right now I am using the String function indexOf to do the search. One suggestion was to use Rabin-Karp as an alternative. I wrote a little test program as follows to test an implementation of Rabin-Karp as follows.
public static void main(String[] args) {
String test = "Mary had a little lamb whose fleece was white as snow";
String p = "was";
long start = Calendar.getInstance().getTimeInMillis();
for (int x = 0; x < 200000; x++)
test.indexOf(p);
long end = Calendar.getInstance().getTimeInMillis();
end = end -start;
System.out.println("Standard Java Time->"+end);
RabinKarp searcher = new RabinKarp("was");
start = Calendar.getInstance().getTimeInMillis();
for (int x = 0; x < 200000; x++)
searcher.search(test);
end = Calendar.getInstance().getTimeInMillis();
end = end -start;
System.out.println("Rabin Karp time->"+end);
}
And here is the implementation of Rabin-Karp that I am using:
import java.math.BigInteger;
import java.util.Random;
public class RabinKarp {
private String pat; // the pattern // needed only for Las Vegas
private long patHash; // pattern hash value
private int M; // pattern length
private long Q; // a large prime, small enough to avoid long overflow
private int R; // radix
private long RM; // R^(M-1) % Q
static private long dochash = -1L;
public RabinKarp(int R, char[] pattern) {
throw new RuntimeException("Operation not supported yet");
}
public RabinKarp(String pat) {
this.pat = pat; // save pattern (needed only for Las Vegas)
R = 256;
M = pat.length();
Q = longRandomPrime();
// precompute R^(M-1) % Q for use in removing leading digit
RM = 1;
for (int i = 1; i <= M - 1; i++)
RM = (R * RM) % Q;
patHash = hash(pat, M);
}
// Compute hash for key[0..M-1].
private long hash(String key, int M) {
long h = 0;
for (int j = 0; j < M; j++)
h = (R * h + key.charAt(j)) % Q;
return h;
}
// Las Vegas version: does pat[] match txt[i..i-M+1] ?
private boolean check(String txt, int i) {
for (int j = 0; j < M; j++)
if (pat.charAt(j) != txt.charAt(i + j))
return false;
return true;
}
// check for exact match
public int search(String txt) {
int N = txt.length();
if (N < M)
return -1;
long txtHash;
if (dochash == -1L) {
txtHash = hash(txt, M);
dochash = txtHash;
} else
txtHash = dochash;
// check for match at offset 0
if ((patHash == txtHash) && check(txt, 0))
return 0;
// check for hash match; if hash match, check for exact match
for (int i = M; i < N; i++) {
// Remove leading digit, add trailing digit, check for match.
txtHash = (txtHash + Q - RM * txt.charAt(i - M) % Q) % Q;
txtHash = (txtHash * R + txt.charAt(i)) % Q;
// match
int offset = i - M + 1;
if ((patHash == txtHash) && check(txt, offset))
return offset;
}
// no match
return -1; // was N
}
// a random 31-bit prime
private static long longRandomPrime() {
BigInteger prime = new BigInteger(31, new Random());
return prime.longValue();
}
// test client
}
The implementation of Rabin-Karp works in that it returns the correct offset of the string I am looking for. What is surprising to me though is the timing statistics that occurred when I ran the test program. Here they are:
Standard Java Time->39
Rabin Karp time->409
This was really surprising. Not only is Rabin-Karp (at least as it is implemented here) not faster than the standard java indexOf String function, it is slower by an order of magnitude. I don't know what is wrong (if anything). Any one have thoughts on this?
Thanks,
Elliott
