Since the Group Policy settings are stored in the Registry, the easiest method to create department-wide configurations might be through a .reg file,
Microsoft maintains a list of the Group Policy Registry keys. For example, line 188 shows HKLM\Software\Microsoft\Windows\CurrentVersion\Policies\Explorer!AllowOnlineTips controls online tooltips.
Rather than synthesizing the .reg script from scratch, you could "reverse engineer" such a script by taking a snapshot of the Registry of a freshly created clone, applying appropriate changes through the Group Policy Editor, and then diffing that snapshot with a new one. An excellent tool for this purpose is Nirsoft's RegistryChangesView, which can "export the Registry changes into a standard .reg file".
Of course, if you're running a batch script anyway, just add a line to it:
regedit.exe /s "full path to your .reg file"
You can also use a PowerShell script to convert Registry files to XML, which can then be pasted directly into Microsoft's Group Policy Editor.
For example,